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Doctoral Thesis
DOI
https://doi.org/10.11606/T.87.2012.tde-26112012-082543
Document
Author
Full name
Ana Priscila Perini
Institute/School/College
Knowledge Area
Date of Defense
Published
São Paulo, 2012
Supervisor
Committee
Botosso, Viviane Fongaro (President)
Durigon, Edison Luiz
Granato, Celso Francisco Hernandes
Harsi, Charlotte Marianna
Passos, Saulo Duarte
Title in Portuguese
Diversidade genética dos Vírus Parainfluenza 1, 2 e 3, identificados em amostras colhidas no Hospital Universitário da Universidade de São Paulo, durante os anos de 1995 a 2005.
Keywords in Portuguese
Doenças infecciosas
Epidemiologia
Paramyxoviridae
Sequenciamento genético
Virologia
Abstract in Portuguese
Introdução: Os vírus parainfluenza são importante causa de infecções respiratórias. Na população pediátrica a doença característica associada com HPIV-1 e 2 é a laringotraqueobronquite, enquanto que o HPIV-3 está associado com a pneumonia e bronquiolite. Objetivos: Realizar a análise molecular do fragmento do gene da HN. Métodos: Foram analisados aspirados nasofaríngeos coletados entre 1995 a 2005, de crianças com doença respiratória aguda. A detecção dos HPIV 1, 2 e 3 foi realizada por multiplex RT-PCR. Posteriormente, o fragmento de gene HN foi amplificado, sequenciado e, a análise molecular foi realizada. Resultados e discussão: Um total de 6% amostras foram positivas para HPIV, sendo o HPIV-3 o vírus mais prevalente durante todos os anos estudados, o que corresponde a 80% dos casos positivos, seguido por HPIV-1 (15%) e, HPIV-2 (7%). A maioria das mutações observadas foram silênciosas, no entanto, algumas alterações de aminoácidos foram verificadas em áreas conservadas dos HPIV-3 e HPIV-2, e alterações em sítios potencias de N-glicosilação também foram observados.
Title in English
Genetic diversity of Parainfluenza Virus 1, 2 and 3, identified from samples taken at the University Hospital of São Paulo University, during 1995 to 2005.
Keywords in English
Epidemiology
Genetic sequencing
Infectious diseases
Paramyxoviridae
Virology
Abstract in English
Introduction: In paediatric population the characteristic illness associated with HPIV-1 and -2 is laryngotracheobronchitis, whereas HPIV-3 is associated with pneumonia and bronchiolitis. There are 5 virus distributed in two distinct genus: Respirovirus (HPIVI-1 and HPIV-3) and Rubulavirus (HPIV-2, HPIVI-4A and HIVI-4B). Objectives: To carry out the molecular analysis of the fragment of the HN gene. Methods: Nasopharyngeal aspirates from infants with acute respiratory illness collected from 1995 to 2005, were analyzed. The detection of HPIV 1, 2 and 3 were performed by multiplex RT-PCR and the fragment of HN gene was amplified, sequenced and, the molecular analysis was carried out. Results and discussion: A total of 6% samples were positive for HPIV. The HPIV-3 was the most prevalent virus during, corresponding to 80% of positive cases, followed by HPIV-1 with 15% and HPIV-2 7%. Most mutations observed were silent in all PIVs, however, some amino acids alterations in conserved areas, verified in PIV-3 and PIV-2, and alterations in N-glicosilation sites were observed.
 
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Publishing Date
2012-12-17
 
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