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Doctoral Thesis
DOI
https://doi.org/10.11606/T.42.2009.tde-23102009-130040
Document
Author
Full name
Cristiane Santos de Souza
Institute/School/College
Knowledge Area
Date of Defense
Published
São Paulo, 2009
Supervisor
Committee
Ferreira, Luis Carlos de Souza (President)
Kobarg, Jorg
Schneider, Rene Peter
Soares Netto, Luis Eduardo
Spira, Beny
Title in Portuguese
Análise molecular e estrutural da proteína ligadora de maltose (MalE) de Xanthomonas axonopodis pv. citri.
Keywords in Portuguese
Xanthomonas axonopodis pv citri
Cristalografia
Espectroscopia
Maltose
Microbiologia
Modelagem molecular
Transportadores do tipo ABC
Abstract in Portuguese
A captação de maltose em bactérias é feita por um sistema transportador do tipo ABC composto por uma proteína ligadora de substrato (MalE), duas proteínas transmembrana e uma ATPase. No presente trabalho descrevemos a clonagem, expressão e análise bioquímica e estrutural da proteína MalE da bactéria fitopatogênica Xanthomonas axonopodis pv citri (Xac) O gene malE de Xac foi clonado em vetor de expressão pET28a, a proteína recombinante foi expressa em Escherichia coli e purificada por cromatografia de afinidade ao níquel. Amostras da proteína solúvel foram analisadas quanto à estrutura secundária, interação com possíveis ligantes, estabilidade frente a diferentes condições físico-químicas. Ensaios de cristalização possibilitaram a obtenção de cristais em diferentes condições, um deles apresentou grupo espacial P6122, mas não foi possível resolver a estrutura. Com base nas estruturas conhecidas de ortólogos de MalE, geramos um modelo estrutural para a proteína de Xac e foram feitas análises quanto à interação com trealose e maltose. Modelos estruturais dos componentes transmembrana (LacF e LacG) e ATPase (UgpC) do sistema transportador de maltose de Xac também foram gerados. Os resultados representam uma contribuição importante para o conhecimento sobre a fisiologia e sistemas de transporte de Xac.
Title in English
Molecular and structural analysis of maltose binding protein (MalE) of Xanthomonas axonopodis pv citri.
Keywords in English
Xanthomonas axonopodis pv citri
ABC transporters
Crystallography
Maltose
Microbiology
Molecular modelling
Spectroscopy
Abstract in English
Maltose uptake in bacteria is mediated by an ABC transporter comprising a substrate binding protein (MalE), two transmembrane proteins, and one ATPase. In the present study, we describe the cloning, expression and biochemical as well as structural analyses of the MalE protein of the phytopagen Xanthomonas axonopodis pv citri (Xac). The malE gene of Xac was cloned in the pET28a expression vector, the recombinant protein was expressed in Escherichia coli and, subsequently, purified by nickel affinity chromatography. Samples of soluble protein were analyzed regarding secondary structure, interaction with putative ligants and stability under different physico-chemical conditions. Crystallization trials were carried out under different conditions, one particular condition yielded crystal with a P6122space group, but the structure was not solved. Based on known ortholog structures, a structural model for Xac MalE was obtained allowing interaction with modeled threhalose and maltose. Structural models the transmembrane (LacF and LacG) and ATPase (UgpC) components were also obtained. The present results represent an important contribution to the knowledge of the physiology and transporter systems found in Xac.
 
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Publishing Date
2009-12-04
 
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