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Doctoral Thesis
DOI
https://doi.org/10.11606/T.42.2013.tde-19032014-093214
Document
Author
Full name
Adélia Hiroko Nagamori Kawamoto
Institute/School/College
Knowledge Area
Date of Defense
Published
São Paulo, 2013
Supervisor
Committee
Durigon, Edison Luiz (President)
Paiva, Terezinha Maria de
Pereira, Luiz Eloy
Pierulivo, Enrique Mario Boccardo
Richtzenhain, Leonardo José
Title in Portuguese
Caracterização molecular e sorológica da Influenza A isoladas de aves residentes, silvestres e migratórias no estado de São Paulo.
Keywords in Portuguese
Orthomyxoviridae
Aves silvestres
Influenza
Sequenciamento genético
Testes sorológicos
Abstract in Portuguese
O Vírus de Influenza aviária pertence à família Orthomyxoviridae. Nos últimos anos vários subtipos da gripe aviária de baixa patogenicidade têm causado surtos e epidemia em humanos e aves domésticas. As aves selvagens e migratórias participam da manutenção e transmissão interespécie dos 16 subtipos de hemaglutinina e 9 subtipos de Neuraminidase na natureza. Nosso estudo teve como objetivo subtipar as amostras positivas através de teste sorológico de inibição da hemaglutinação (HI) e técnica de Biologia Molecular. Foram positivas as amostras das espécies: Elaenia mesoleuca (2), Sporophila lineola (1) Sporophila caerulescen (1), Vireo olivaceus (3), Columbina talpacoti (3), Paroaria dominicana (2), foram coletadas das reservas experimentais de campo localizadas no estado de São Paulo-Brasil,durante os anos de 1997 e 1998. Tais amostras foram identificadas por teste preconizado HI(de acordo com WHO) usando 20 soros imunes anti-influenza do tipo A e um do tipo B e análise de RT-PCR com sequenciamento do gene Hemaglutinina e Neuraminidase. O teste HI demonstrou que 12 amostras apresentou estreita afinidade com com soros imune A/HongKong/1/68 (H3N2), A/Equine/Miami/63 (H3N8) and A/Duck/Ukraine/63 (H3N8). As análises de sequenciamento do gene hemaglutinina e Neuraminidase desses isolados revelaram uma alta homologia com os do subtipos H3N2. As análise filogenética e variabilidade genética em comparação com as seqüências de Genbank representando diversos países, mostraram que nossas amostras apresentou estreita homologia com os vírus do subtipos que circularam em Victoria (1990), Siena (1991) e Beijim (1989). A análise de amino ácido indicou que há mutações não sinônimas no gene da Hemaglutinina exclusiva de nossas amostras e as mutações da Neuraminidase são sinônimos, quando comparadas com amostras de AIV de outros paises. Nossas Amostras quando análisadas a NA, não apresentaram mutações nos aminoácidos y285t e r297n que conferem resistencia aos inibidores da Neuminidase.
Title in English
Molecular and serological characterization of influenza A isolated from wild, migratory and resident birds in the state of São Paulo.
Keywords in English
Orthomyxoviridae
Genetic sequencing
Influenza
Serological tests
Wild birds
Abstract in English
Avian Influenza virus belongs to Orthomyxoviridae family. The last years several low pathogenic avian influenza subtypes have caused outbreaks and epidemic in human and poultry. The wild and migrating birds may be participating of maintenance and interspecies transmission of the sixteen subtypes of the Hemagglutinina and nine Neuraminidase in nature. Our study was aimed to subtype the positive samples for influenza A isolated from migrating and wild birds by molecular technique and Haemagglutination inhibition test (HI). The samples from species Elaenia mesoleuca (2), Sporophila lineola (1) Sporophila caerulescens (1), Vireo olivaceus (3), Columbina talpacoti (3), Paroaria dominicana (2), were collected in reserves and experimental field stations located in the São Paulo State - Brazil, during the years 1997 and 1998. The samples were identified by HI test (according WHO) using the 20 antibody patterns anti-influenza A type and one for the influenza type B and RT-PCR and Sequence analysis of Hemaglutinina and Neuraminidase gene. The HI test demonstrated that 12 samples presented an antigenic close relationship with A/HongKong/1/68 (H3N2), A/ Equine/Miami /63 (H3N8) and A/Duck/ Ukraine/ 63 (H3N8) antiserum.The sequencing analyses of Hemaglutinin and Neuraminidase gene of these 12 isolates revealed a high homology with H3N2. Phylogenetic analysis and genetic variability compared with genbank sequence representing several countries, showed that our current samples submitted close homology to that circulated in Victoria (1990), Siena (1991) and Beijim (1989). Amino acid analysis compared our samples with representative genbank samples all of mutation are synonymous.
 
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Publishing Date
2014-03-29
 
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