• JoomlaWorks Simple Image Rotator
  • JoomlaWorks Simple Image Rotator
  • JoomlaWorks Simple Image Rotator
  • JoomlaWorks Simple Image Rotator
  • JoomlaWorks Simple Image Rotator
  • JoomlaWorks Simple Image Rotator
  • JoomlaWorks Simple Image Rotator
  • JoomlaWorks Simple Image Rotator
  • JoomlaWorks Simple Image Rotator
  • JoomlaWorks Simple Image Rotator
 
  Bookmark and Share
 
 
Master's Dissertation
DOI
https://doi.org/10.11606/D.11.2016.tde-09082016-170155
Document
Author
Full name
Flávia de Moraes Franco
E-mail
Institute/School/College
Knowledge Area
Date of Defense
Published
Piracicaba, 2016
Supervisor
Committee
Labate, Carlos Alberto (President)
Rodrigues, Maria Juliana Calderan
Verdi, Maria Carolina Quecine
Title in Portuguese
Caracterização do proteoma nuclear e do perfil metabólico primário de folhas da cana-de-açúcar (Saccharum spp) sob condição de déficit hídrico e recuperação
Keywords in Portuguese
Cana-de-açúcar
Déficit hídrico
Metabolômica
Proteômica
Recuperação
Abstract in Portuguese
A cana-de-açúcar é uma das principais culturas em países tropicais. O Brasil, além de ser o maior produtor mundial, é também líder em produção de açúcar e álcool. Atualmente, a maior parte da cana-de-açúcar cultivada no Brasil encontra-se em condições , como resultado, a cultura é sujeita ao déficit hídrico em alguns estágios. Portanto, é essencial entender as respostas fisiológicas e moleculares da planta à disponibilidade de água. Nesse contexto, as análises de metabolômica e proteômica objetivam identificar diferentes vias metabólicas e proteínas relacionadas ao mecanismo de defesa e de recuperação. Plantas de Saccharum spp com sete meses de idade foram submetidas a diferentes condições hídricas, déficit e reidratação, e amostras controle foram mantidas irrigadas. A identificação do perfil metabólico primário foi realizada através da cromatografia gasosa combinada com espectrometria de massas (GC-MS). Para identificação das proteínas nucleares, as amostras complexas foram digeridas, e posteriormente, sequenciadas por (LC-MS). As análises estatísticas entre os tratamentos (PLS-DA) mostraram diferenças significativas tanto para metabólitos quanto para as proteínas. Um total de 86 metabólitos foram identificados, onde 8 compostos foram preferencialmente abundantes no estresse, e 10 na recuperação e, portanto, podem ser utilizados como marcadores. Alguns desses compostos participam de vias metabólicas comuns, como biossíntese de alcaloides derivados da ornithine, lysine e nicotinate e de biossíntese de fenilpropanoides. Metabólitos que não participam dessas vias mas foram, pelo menos, duas vezes mais abundantes nos tratamentos quando comparados ao controle também foram discutidos, para o déficit destacam-se galacturonic acid-1-phosphate, pyroglutamic acid e creatinine e para recuperação methyl dihydrogen phosphate, phosphoric acid e 2-hydroxypyridine. Um total de 761 proteínas foram identificadas, sendo 21 nucleares e responsivas ao déficit hídrico, e 32 nucleares e relacionadas ao processo de recuperação. As classes funcionais das proteínas relacionadas ao déficit são de tradução e processo de oxidação-redução, e das proteínas da recuperação são de tradução e proteólise envolvida no processo catabólico proteico. A combinação de diferentes técnicas nesse estudo revela uma dinâmica regulatória complexa no mecanismo de tolerância da cana-de-açúcar ao déficit hídrico.
Title in English
Characterization of nuclear proteome and primary metabolites profile of sugarcane leaves (Saccharum spp) under water stress and recovery
Keywords in English
Metabolomics
Proteomics
Recovery
Sugarcane
Water stress
Abstract in English
Sugarcane is one of the main crops in tropical countries. Brazil, besides being the world's largest producer of this crop, is also a leader in sugar and ethanol production. Nowadays, most of the sugarcane growing in Brazil is under rain-fed conditions, as a result, the culture is subject to water deficit at certain stages. Thus, it is essential to understand the physiological and molecular plant responses to water availability. In this context, the metabolomic and proteomic analyses aims to identify different metabolic pathways and proteins related to the mechanisms of tolerance and recovery. Samples of seven month old plants of Saccharum spp were subjected to different water conditions, deficit and rehydratation, whereas control samples were kept irrigated. The identification of primary metabolite profile was performed by Gas-Chromatography combined with Mass- Spectrometry (GC-MS). To identify nuclear proteins, the complex samples were digested and then sequenced by LC-MSE. Statistical analyses among treatments PLS-DA showed significant differences in both metabolites and proteins of Saccharum spp in different conditions. A total of 86 metabolites were identified, where 8 are preferably abundant in water stress and 10 in recovery, thus, they can be used as markers. Some of these compounds are present in common pathways like biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid and biosynthesis of phenylpropanoids. Metabolites that do not participate in these pathways, but that were at least two times more abundant in treatments when compared to control, were also discussed. They were galacturonic acid-1-phosphate, pyroglutamic acid and creatinine that were related to deficit condition and methyl dihydrogen phosphate, phosphoric acid and 2-hydroxypyridine to recovery. A total of 761 proteins were identified, of which 21 were nuclear and drought responsive and 32 were nuclear and recovery responsive. The functional classes of water stress proteins are translation and oxidation-reduction process and of recovery proteins are translation and proteolysis involved in cellular protein catabolic process. The combination of different techniques in this study revealed a complex regulatory dynamics in the mechanism of sugarcane water stress tolerance that have not been discussed in the literature.
 
WARNING - Viewing this document is conditioned on your acceptance of the following terms of use:
This document is only for private use for research and teaching activities. Reproduction for commercial use is forbidden. This rights cover the whole data about this document as well as its contents. Any uses or copies of this document in whole or in part must include the author's name.
Publishing Date
2016-08-17
 
WARNING: Learn what derived works are clicking here.
All rights of the thesis/dissertation are from the authors
CeTI-SC/STI
Digital Library of Theses and Dissertations of USP. Copyright © 2001-2024. All rights reserved.